Concept


In 1902, Archibald Garrod described the inherited disorder alkaptonuria as an "inborn error of metabolism." He proposed that a gene mutation causes a specific defect in the biochemical pathway for eliminating liquid wastes. The phenotype of the disease — dark urine — is a reflection of this error. This hypothesis was rigorously proven in 1941 by George Beadle and Edward Tatum, using the simple bread mold Neurospora. First, they found that molds exposed to radiation lose the ability to produce essential nutrients, and this slowed, even stopped the growth of the mold. Then, they found that growth can be restored by providing the mutated mold with a specific supplement. They reasoned that each mutation must inactivate the enzyme (protein) needed to synthesize the nutrient. Thus, one gene carries the directions for making one protein.

Animation


Hello, I'm George Beadle. In 1941, Edward Tatum and I did experiments using Neurospora crassa — red bread mold. Our experiments proved Archibald Garrod's 1902 theory that hereditary diseases are "inborn errors of metabolism" — missing or false steps in the body's chemical pathways. For most of its life cycle, Neurospora is a haploid organism. This means that there is only one copy of each gene, so we didn't have to worry about dominant and recessive alleles, as had Mendel. In the lab, Neurospora grows well on "minimal" agar that contains only a few simple sugars, inorganic salts, and the vitamin biotin. Neurospora must have enzymes that convert these simple substances into the amino acids and vitamins necessary for growth. We reasoned that if we mutate any one of the genes that makes an enzyme, for example gene A, we should get a Neurospora strain that cannot grow on minimal medium. The mutant would be able to grow if we add the enzyme product as a supplement. Edward Tatum and I set out to find these nutritional mutants. In 1927, Herman Muller showed that X-rays cause mutations in genes. So, we irradiated a Neurospora culture with X-rays. We expected to get some rare mutants that would not grow on minimal media. We grew the offspring of the irradiated Neurospora on "complete" media that contained all the vitamins and amino acids. Next, we tested the ability of each of these cultures to grow on minimal media. Most of these cultures grew on minimal media, meaning they didn't have a genetic mutation of the kind we were looking for. However, the 299th culture did not grow on minimal medium. We then tried growing Culture#299 on minimal media supplemented with either amino acids or vitamins. We found that Culture#299 did not grow on minimal medium with amino acid supplements, but did grow on minimal medium with vitamin supplements. Therefore, Culture#299 must not be able to make one of the vitamins. We then had to figure which vitamin was missing in Culture#299. We did this by testing Culture#299's ability to grow on minimal medium supplemented with single vitamins. We found that Culture#299 grew only if we provided the vitamin B6 . This was our first Neurospora mutant. It could not make vitamin B6 on its own because one of the enzymes in the B6 synthesis pathway must be affected. Thus, the gene making this enzyme must have been mutated by X-rays. By adding vitamin B6 as a supplement to the minimal medium, the mutation could be compensated for and culture#299 could grow. Using this method of selection and supplementation, we isolated many different types of Neurospora mutants. Genetic mutations affect metabolic pathways, and we confirmed the synthesis pathway for many vitamins and amino acids. For example, the amino acid arginine is synthesized in a step-wise process catalyzed by enzymes. A precursor molecule is converted into ornithine then citrulline and finally arginine. If one gene makes one enzyme, there should be a genetic mutation for each step of this synthesis pathway. Among the arginine mutants there should be strains that need either ornithine or citrulline or arginine as supplements. In 1944, our colleagues, Adrian Srb and Norman Horowitz, found these mutant strains. They started with Neurospora strains that needed arginine as a supplement. These strains had mutations in different genes. For example, mutant#1 couldn't make ornithine. So, the gene that makes the enzyme for ornithine synthesis must have been mutated. If ornithine is added to the media, citrulline and then arginine would be made, and mutant#1 could grow. Similarly, a genetic mutation in mutant#2 affected the enzyme that makes the arginine precursor citrulline. Adding citrulline as a supplement complemented the mutation and drove arginine synthesis to completion. And a genetic mutation in #3 affected the final step of arginine synthesis — the conversion of citrulline to arginine. By adding arginine as a supplement, the mutation was complemented and mutant#3 could grow. With each mutated gene, only one step of the metabolic pathway is affected. Therefore, one gene is responsible for one enzyme or protein. We had biochemical proof of Sir Arthur Garrod's 1908 proposal of the "inborn errors of metabolism."

Gallery


Young George Beadle, around 1908.
George Beadle at work in his lab at Stanford.
Neurospora mutants laid out to show the experimental design.
1936 diary entry of Frank Blair Hanson, then President of the Rockefeller Foundation. He noted that Beadle is a "man to watch." Also, note the salary for graduate students.
The Rockefeller Foundation funded Beadle's experiments. This 1943 letter is a progress report Beadle wrote to the Rockefeller President.
Beadle and assistant in the Neurospora storeroom at Stanford, 1949.
Telegram sent to Edward Tatum telling him that he, George Beadle and Joshua Lederberg will share the 1958 Nobel Prize in Physiology or Medicine.
George Beadle at the Nobel Awards ceremonies.

Audio/Video


Audio Glossary

Amino acids, Enzyme, Gene, Gene expression, Protein

Video Interviews

Joshua Lederberg

Joshua Lederberg is a Professor Emeritus at the Rockefeller University. He was a graduate student of Ed Tatum.

Clip 1 (0:49)
Describing Ed Tatum as a scientist, advisor, and friend.

Biography


 

George Beadle had successful research careers in corn and Drosophila genetics, before starting the field of Neurospora research. George Beadle and Edward Tatum used Neurospora to prove that "one gene makes one protein." Tatum also had a role in starting bacterial genetics.

GEORGE WELLS BEADLE (1903-1989)

George Beadle, "Beets" to his friends, was born in Wahoo, Nebraska. His father was a farmer and had a 40-acre farm just outside Wahoo. Beadle's mother died when he was four, and Beadle, his brother, and his sister were raised by his father and housekeepers.

Beadle's father thought he might become a farmer. However, Beadle's high school science teacher encouraged him to go to college. Beadle graduated from the University of Nebraska College of Agriculture with a science degree in 1926, and stayed an extra year to finish a master's degree.

While working on his master's degree on the ecology of grasses, Beadle became interested in genetics. He applied to graduate school at Cornell University and, in 1927, joined R. A. Emerson's group to work on corn genetics. Emerson's group included Barbara McClintock who later helped Beadle figure out the chromosome number of Neurospora.

After he finished his Ph.D. in 1931, Beadle did post doctoral work in T. H. Morgan's newly established biology division at Caltech and then in Paris with Boris Ephrussi. Beadle worked with the "hot" genetics model of the day, Drosophila melanogaster. He published papers on crossing over and developed the technique of imaginal disc transplantation. Beadle, with Ephrussi, also published a 1937 paper on the interaction of genes in determining Drosophila eye color. Hints of the "one gene-one enzyme" hypothesis were in this paper. Beadle and Ephrussi alluded to genes making substances necessary for pigmentation and to mutations in the genes disrupting this process.

In 1937, Beadle teamed up with Edward Tatum at Stanford University to isolate and identify the eye color "substances." They were beaten by another group; however, this just convinced Beadle that they needed a simpler genetic system to study the question of gene action. He found it in Neurospora, and in 1940, Beadle converted his Drosophila lab into one set up to grow and culture Neurospora.

Beadle's plan to mutate Neurospora and test for nutritional deficiencies was sound; however, there was no guarantee of success. Beadle and Tatum agreed ahead of time only to test 5,000 cultures before giving up on the idea. They collected and stored over 1,000 irradiated cultures before they actually tested any of them. Success came with the 299th culture. Beadle and Tatum published their results in 1941 and shared the 1958 Nobel Prize in Physiology or Medicine.

Beadle was a popular and much admired boss. Enthusiastic, practical and funny, no job was too big or too small. He directed as well as did the experiments; he also took care of the lab by doing many of the small repairs and making some of the necessary equipment.

In 1945, Beadle accepted the Chair of the Division of Biology at Caltech, replacing T. H. Morgan who had died. From 1961 to 1968, Beadle served as the President of the University of Chicago, and was able to bolster and strengthen the university's image. After retirement in 1969, Beadle took up research again to try and determine the origin of maize. In 1981, Beadle developed Alzheimer disease. He died in 1989, bringing a distinguished career to an end.

EDWARD LAWRIE TATUM (1909-1975)

Edward Tatum was born in Boulder, Colorado. While Tatum was growing up, his family moved a number of times. His father had different teaching positions at various universities and colleges in the Midwest. Tatum grew up in a science-oriented household as his father had a Ph.D and an M.D.

Tatum obtained a Bachelor's degree from the University of Wisconsin in 1931, and he stayed to do graduate work on nutritional requirements of different bacterial strains. This research had a practical aspect. The bacterial strains Tatum worked on were found in milk. By knowing what bacteria needed for growth, strategies could have been developed to control their growth.

After his Ph.D., Tatum spent a year at the University of Utrecht, Netherlands, doing the same type of research. In 1937, his professors at Wisconsin forwarded him a job ad. George Beadle was looking for a research associate for his new lab at Stanford University. The job was an excellent research opportunity; however, Tatum's professors advised him to go into the dairy industry and do butter research - the money was better.

Tatum chose intellectual challenge over money. He spent the first few years in Beadle's lab isolating and identifying the "substances" involved in Drosophila eye color determination - an extension of Beadle's earlier work. They were beaten by another group, but this set into motion the events leading up to the Neurospora experiments. The switch to Neurospora supposedly came about after one of the biology classes Tatum volunteered to teach. Beadle was sitting in on the lecture and was reminded of the Neurospora system; he thought it would be the perfect system to use to study gene action.

The new Neurospora project had no guarantee of success. So, Beadle and Tatum had a deal; they would test only 5,000 Neurospora cultures. If they couldn't find one nutritional mutant in 5,000, they would abandon the project. The experiment was a success and Edward Tatum shared the 1958 Nobel Prize in Physiology or Medicine.

In 1945, Tatum had a short stint at Washington University in St. Louis, and then moved to Yale. He was using the Neurospora strategy to find genetic mutants in bacteria. He used Escherichia coli strain K12 from the Stanford collections. At the time, K12 was not the most common E. coli strain in use, but this proved to be a fortuitous choice. K12 had the properties that allowed Tatum and his student Joshua Lederberg to demonstrate bacterial recombination. Lederberg shared the 1958 Nobel Prize in Physiology or Medicine.

In 1948, Tatum returned to Stanford and in 1956 was appointed the head of the new Department of Biochemistry. In 1957, Tatum left to accept a professorship at the Rockefeller Institute and stayed until his death.

Tatum was a very supportive boss. He had his own goals for his lab, but never failed to actively encourage his students in their research interests. He was on the editorial board of science journals such as Genetics, Science, and the Journal of Biological Chemistry. Tatum also served as scientific advisor on many boards and helped set the national policy on training for students and post doctoral fellows. Tatum died in 1975 from heart failure complicated by emphysema from a lifetime of cigarette smoking.

Factoid

Links


 

Links

Neurospora Sporulation Rhythm

Chemistry professor Peter Ruoff studies enzymes and how they work in the biological systems. The site explains the growth cycle of Neurospora and shows a quick time movie of Neurospora growth taken by Dr. Van D. Gooch.

Fungal Genetics Stock Center

Located at the University of Kansas Medical Center in Kansas City, Kansas, the Fungal Genetics Stock Center (FGSC) is the repository of information on fungal strains like Neurospora. Intended for research scientists, the site has a methods section for handling and growing fungi, and fungal strains, and DNA can be ordered from them. The FGSC also puts out a newsletter.

Bibliography

  • Beadle, G. W., and Tatum, E., 1941, Genetic Control of Biochemical Reactions in Neurospora, Proc. Nat. Acad. Sci., U. S. A., 27: 499-506.

  • Davidson, J.N., 1965, The Biochemistry of the Nucleic Acids, John Wiley & Sons, Inc., New York.

  • Dunn, L.C., 1991, A Short History of Genetics: The Development of Some of the Main Lines of Thought: 1864-1939, Iowa State University Press, Ames.

  • Judson, Horace Freeland, 1979, The Eighth Day of Creation: Makers of the Revolution in Biology, Simon and Schuster, New York.

  • Kay, Lily E., 1993, The Molecular Vision of Life, Oxford University Press, New York.

  • Lagerkvist, Ulf, 1998, DNA Pioneers and Their Legacy, Yale University Press, New Haven.

  • Lederberg, Joshua, 1979, Edward Lawrie Tatum, Ann. Rev. Genet., 13: 1-5.

  • Morange, Michel, 1998, A History of Molecular Biology, Harvard University Press, Cambridge, Massachusetts.

  • Nobel Lectures in Molecular Biology 1933-1975, 1977, Elsevier North-Holland, Inc., New York.

  • Olby, Robert, 1974, The Path to the Double Helix: The Discovery of DNA, Dover Publications, Inc., New York.

  • Portugal, Franklin H., and Cohen, Jack S., 1977, A Century of DNA: A History of the Structure and Function of the Genetic Substance, The Massachusetts Institute of Technology, Cambridge, Massachusetts.

  • Rosenfield, Israel, Ziff, Edward, and Van Loon, Borin, 1983, DNA for Beginners, Writers and Readers Publishing, Inc.

  • Srb, Adrian M., 1990, G. W. Beadle, Annu. Rev. Genet., 24: 1-4.

  • Sturtevant, A. H., 1965, A History of Genetics, Harper & Row, Publishers, New York.

  • Taylor, J. Herbert, 1965, Selected Papers on Molecular Genetics, Academic Press, New York.

  • Watson, James D., 1987, Molecular Biology of the Gene, The Benjamin/Cummings Publishing Company, Inc., Menlo Park, California.

Glossary


Amino acids - A group of 20 different kinds of small molecules that link together in long chains to form proteins. Often referred to as the "building blocks" of proteins.
Enzyme - A protein that encourages a biochemical reaction, usually speeding it up. Organisms could not function if they had no enzymes.
Gene - The functional and physical unit of heredity passed from parent to offpsring. Genes are pieces of DNA, and most genes contain the information for making a specific protein.
Gene expression - A highly specific process in which a gene is switched on at a certain time and begins production of its protein.
Protein - A large complex molecule made up of one or more chains of amino acids. Proteins perform a wide variety of activities in the cell.

Children resemble their parents.
Genes come in pairs.
Genes don't blend.
Some genes are dominant.
Genetic inheritance follows rules.
Genes are real things.
All cells arise from pre-existing cells.
Sex cells have one set of chromosomes; body cells have two.
Specialized chromosomes determine gender.
Chromosomes carry genes.
Genes get shuffled when chromosomes exchange pieces.
Evolution begins with the inheritance of gene variation.
Mendelian laws apply to human beings.
Mendelian genetics cannot fully explain human health and behavior.
DNA and proteins are the molecules of the cell nucleus.
A gene is made of DNA.
Bacteria and viruses have DNA too.
The DNA molecule is shaped like a twisted ladder.
A half DNA ladder is a template for copying the whole.
RNA is an intermediary between DNA and protein.
DNA words are three letters long.
A gene is a discrete sequence of DNA nucleotides.
The RNA message is sometimes edited.
Some viruses store genetic information in RNA.
RNA was the first genetic molecule.
Mutations are changes in genetic information.
Some types of mutations are automatically repaired.
A chromosome is a package for DNA.
Higher cells incorporate an ancient chromosome.
Some DNA does not encode protein.
Some DNA can jump.
Genes can be turned on and off.
Genes can be moved between species.
DNA responds to signals from outside the cell.
Different genes are active in different kinds of cells.
Master genes control basic body plans.
Development balances cell growth and death.
A genome is an entire set of genes.
Living things share common genes.
DNA is only the starting point for understanding human biology.
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